Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm11539-201ENSMUST00000119837 557 ntBASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm13436-201ENSMUST00000120418 567 ntBASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fndc4Q3TR08 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Asic1-205ENSMUST00000228185 1818 ntBASIC13.67□□□□□ -0.22
Fndc4Q3TR08 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Gm13559-201ENSMUST00000120476 863 ntBASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fndc4Q3TR08 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Gm15565-201ENSMUST00000118890 427 ntBASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fndc4Q3TR08 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms