Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.52■□□□□ 0.24
Vps45P97390 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps45P97390 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Vps45P97390 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.52■□□□□ 0.24
Vps45P97390 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Gm2651-201ENSMUST00000203560 838 ntBASIC16.52■□□□□ 0.24
Vps45P97390 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps45P97390 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.52■□□□□ 0.24
Vps45P97390 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps45P97390 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.52■□□□□ 0.23
Vps45P97390 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Vps45P97390 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.52■□□□□ 0.23
Vps45P97390 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps45P97390 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps45P97390 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Vps45P97390 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps45P97390 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps45P97390 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps45P97390 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps45P97390 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps45P97390 Rps4l-201ENSMUST00000071745 943 ntBASIC16.51■□□□□ 0.23
Vps45P97390 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Vps45P97390 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps45P97390 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.51■□□□□ 0.23
Vps45P97390 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps45P97390 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps45P97390 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.5■□□□□ 0.23
Vps45P97390 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps45P97390 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps45P97390 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps45P97390 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.49■□□□□ 0.23
Vps45P97390 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.49■□□□□ 0.23
Vps45P97390 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps45P97390 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps45P97390 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps45P97390 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps45P97390 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps45P97390 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps45P97390 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps45P97390 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vps45P97390 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.48■□□□□ 0.23
Vps45P97390 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms