Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.43■□□□□ 0.38
Lig3P97386 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.43■□□□□ 0.38
Lig3P97386 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lig3P97386 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lig3P97386 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lig3P97386 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lig3P97386 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Lig3P97386 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.42■□□□□ 0.38
Lig3P97386 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Lig3P97386 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lig3P97386 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lig3P97386 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lig3P97386 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.42■□□□□ 0.38
Lig3P97386 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lig3P97386 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lig3P97386 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lig3P97386 Gm13216-201ENSMUST00000117145 591 ntBASIC17.41■□□□□ 0.38
Lig3P97386 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.41■□□□□ 0.38
Lig3P97386 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.41■□□□□ 0.38
Lig3P97386 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.41■□□□□ 0.38
Lig3P97386 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lig3P97386 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.41■□□□□ 0.38
Lig3P97386 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lig3P97386 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lig3P97386 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lig3P97386 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.4■□□□□ 0.38
Lig3P97386 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.4■□□□□ 0.38
Lig3P97386 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lig3P97386 Mir5131-201ENSMUST00000175426 93 ntBASIC17.4■□□□□ 0.38
Lig3P97386 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.4■□□□□ 0.38
Lig3P97386 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.4■□□□□ 0.38
Lig3P97386 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lig3P97386 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lig3P97386 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lig3P97386 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.39■□□□□ 0.37
Lig3P97386 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.39■□□□□ 0.37
Lig3P97386 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.39■□□□□ 0.37
Lig3P97386 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lig3P97386 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Lig3P97386 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lig3P97386 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms