Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SgcbP82349 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SgcbP82349 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Gm15165-201ENSMUST00000118140 502 ntBASIC14.26□□□□□ -0.13
SgcbP82349 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.26□□□□□ -0.13
SgcbP82349 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SgcbP82349 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SgcbP82349 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SgcbP82349 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SgcbP82349 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.26□□□□□ -0.13
SgcbP82349 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SgcbP82349 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcbP82349 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SgcbP82349 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.25□□□□□ -0.13
SgcbP82349 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Gm12644-201ENSMUST00000119935 606 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Gm15372-201ENSMUST00000120729 834 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.25□□□□□ -0.13
SgcbP82349 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Gm17971-201ENSMUST00000190239 806 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.25□□□□□ -0.13
SgcbP82349 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SgcbP82349 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SgcbP82349 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.25□□□□□ -0.13
SgcbP82349 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcbP82349 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SgcbP82349 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.24□□□□□ -0.13
SgcbP82349 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Gm27867-201ENSMUST00000184778 125 ntBASIC14.24□□□□□ -0.13
SgcbP82349 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SgcbP82349 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.24□□□□□ -0.13
SgcbP82349 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcbP82349 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SgcbP82349 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SgcbP82349 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcbP82349 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms