Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Atf1P81269 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.87□□□□□ -0.19
Atf1P81269 Gm10052-201ENSMUST00000168019 960 ntBASIC13.87□□□□□ -0.19
Atf1P81269 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.87□□□□□ -0.19
Atf1P81269 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.87□□□□□ -0.19
Atf1P81269 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Gm7729-201ENSMUST00000050143 801 ntBASIC13.87□□□□□ -0.19
Atf1P81269 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Atf1P81269 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Atf1P81269 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Atf1P81269 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Atf1P81269 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Atf1P81269 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.87□□□□□ -0.19
Atf1P81269 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.86□□□□□ -0.19
Atf1P81269 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Atf1P81269 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Atf1P81269 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Gm44430-201ENSMUST00000203376 995 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Atf1P81269 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Atf1P81269 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.86□□□□□ -0.19
Atf1P81269 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf1P81269 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Atf1P81269 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.85□□□□□ -0.19
Atf1P81269 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf1P81269 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.85□□□□□ -0.19
Atf1P81269 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Atf1P81269 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf1P81269 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Atf1P81269 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.85□□□□□ -0.19
Atf1P81269 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Atf1P81269 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf1P81269 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Atf1P81269 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf1P81269 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf1P81269 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf1P81269 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms