Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pfn1P62962 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Pfn1P62962 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfn1P62962 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pfn1P62962 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfn1P62962 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfn1P62962 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pfn1P62962 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfn1P62962 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfn1P62962 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pfn1P62962 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pfn1P62962 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.47□□□□□ -0.41
Pfn1P62962 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.47□□□□□ -0.41
Pfn1P62962 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Pfn1P62962 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfn1P62962 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfn1P62962 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.46□□□□□ -0.41
Pfn1P62962 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pfn1P62962 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.46□□□□□ -0.41
Pfn1P62962 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfn1P62962 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfn1P62962 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Gm12382-201ENSMUST00000122005 922 ntBASIC12.46□□□□□ -0.41
Pfn1P62962 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pfn1P62962 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfn1P62962 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Pfn1P62962 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pfn1P62962 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfn1P62962 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pfn1P62962 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pfn1P62962 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.45□□□□□ -0.42
Pfn1P62962 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfn1P62962 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.45□□□□□ -0.42
Pfn1P62962 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfn1P62962 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms