Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm3P62311 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm3P62311 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
Lsm3P62311 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm3P62311 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lsm3P62311 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm3P62311 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Lsm3P62311 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lsm3P62311 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.67□□□□□ -0.06
Lsm3P62311 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.67□□□□□ -0.06
Lsm3P62311 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm3P62311 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm3P62311 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm3P62311 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm3P62311 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Lsm3P62311 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm3P62311 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.66□□□□□ -0.06
Lsm3P62311 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm3P62311 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm3P62311 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.66□□□□□ -0.06
Lsm3P62311 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lsm3P62311 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.65□□□□□ -0.06
Lsm3P62311 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.65□□□□□ -0.06
Lsm3P62311 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.65□□□□□ -0.06
Lsm3P62311 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.65□□□□□ -0.06
Lsm3P62311 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm3P62311 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lsm3P62311 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms