Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NcanP55066 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NcanP55066 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.82■□□□□ 0.28
NcanP55066 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NcanP55066 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.82■□□□□ 0.28
NcanP55066 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NcanP55066 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Gm38294-201ENSMUST00000192831 381 ntBASIC16.82■□□□□ 0.28
NcanP55066 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.82■□□□□ 0.28
NcanP55066 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.82■□□□□ 0.28
NcanP55066 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NcanP55066 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
NcanP55066 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NcanP55066 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NcanP55066 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Gm9794-201ENSMUST00000202370 423 ntBASIC16.81■□□□□ 0.28
NcanP55066 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.81■□□□□ 0.28
NcanP55066 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NcanP55066 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NcanP55066 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.8■□□□□ 0.28
NcanP55066 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.8■□□□□ 0.28
NcanP55066 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.8■□□□□ 0.28
NcanP55066 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NcanP55066 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NcanP55066 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NcanP55066 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NcanP55066 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NcanP55066 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NcanP55066 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.79■□□□□ 0.28
NcanP55066 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.79■□□□□ 0.28
NcanP55066 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NcanP55066 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NcanP55066 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.79■□□□□ 0.28
NcanP55066 Gm18246-201ENSMUST00000221023 728 ntBASIC16.79■□□□□ 0.28
NcanP55066 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.79■□□□□ 0.28
NcanP55066 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NcanP55066 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
NcanP55066 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Gm24158-201ENSMUST00000175263 71 ntBASIC16.78■□□□□ 0.28
NcanP55066 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.78■□□□□ 0.28
NcanP55066 Gm27989-201ENSMUST00000184721 107 ntBASIC16.78■□□□□ 0.28
NcanP55066 Gm18062-201ENSMUST00000208020 547 ntBASIC16.78■□□□□ 0.28
NcanP55066 Gm18055-201ENSMUST00000208254 547 ntBASIC16.78■□□□□ 0.28
NcanP55066 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.78■□□□□ 0.28
NcanP55066 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NcanP55066 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms