Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Mir8102-201ENSMUST00000184148 139 ntBASIC16.32■□□□□ 0.2
Sox1P53783 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.32■□□□□ 0.2
Sox1P53783 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.32■□□□□ 0.2
Sox1P53783 Rarb-207ENSMUST00000225921 2756 ntBASIC16.32■□□□□ 0.2
Sox1P53783 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.32■□□□□ 0.2
Sox1P53783 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sox1P53783 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sox1P53783 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.32■□□□□ 0.2
Sox1P53783 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox1P53783 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sox1P53783 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox1P53783 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.31■□□□□ 0.2
Sox1P53783 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Gm7488-201ENSMUST00000117148 684 ntBASIC16.31■□□□□ 0.2
Sox1P53783 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox1P53783 Gm7787-201ENSMUST00000216858 688 ntBASIC16.31■□□□□ 0.2
Sox1P53783 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.31■□□□□ 0.2
Sox1P53783 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox1P53783 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.31■□□□□ 0.2
Sox1P53783 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox1P53783 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox1P53783 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox1P53783 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox1P53783 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox1P53783 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox1P53783 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.3■□□□□ 0.2
Sox1P53783 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.3■□□□□ 0.2
Sox1P53783 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.3■□□□□ 0.2
Sox1P53783 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox1P53783 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox1P53783 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox1P53783 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sox1P53783 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox1P53783 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.29■□□□□ 0.2
Sox1P53783 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Gm9682-201ENSMUST00000197505 556 ntBASIC16.29■□□□□ 0.2
Sox1P53783 Gm7730-201ENSMUST00000212486 454 ntBASIC16.29■□□□□ 0.2
Sox1P53783 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.29■□□□□ 0.2
Sox1P53783 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox1P53783 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox1P53783 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.29■□□□□ 0.2
Sox1P53783 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox1P53783 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox1P53783 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox1P53783 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sox1P53783 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms