Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Nek1P51954 Gm28033-201ENSMUST00000184224 96 ntBASIC17.87■□□□□ 0.45
Nek1P51954 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.87■□□□□ 0.45
Nek1P51954 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nek1P51954 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nek1P51954 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.87■□□□□ 0.45
Nek1P51954 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nek1P51954 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nek1P51954 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Nek1P51954 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek1P51954 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Gm26039-201ENSMUST00000158152 144 ntBASIC17.85■□□□□ 0.45
Nek1P51954 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nek1P51954 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nek1P51954 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek1P51954 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nek1P51954 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nek1P51954 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.84■□□□□ 0.45
Nek1P51954 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek1P51954 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nek1P51954 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek1P51954 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Nek1P51954 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nek1P51954 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek1P51954 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek1P51954 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nek1P51954 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Gm11355-201ENSMUST00000121120 306 ntBASIC17.83■□□□□ 0.44
Nek1P51954 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.83■□□□□ 0.44
Nek1P51954 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nek1P51954 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.83■□□□□ 0.44
Nek1P51954 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nek1P51954 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.83■□□□□ 0.44
Nek1P51954 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek1P51954 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms