Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.83□□□□□ -0.03
Ptx3P48759 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptx3P48759 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptx3P48759 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.83□□□□□ -0.03
Ptx3P48759 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptx3P48759 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptx3P48759 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.83□□□□□ -0.04
Ptx3P48759 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptx3P48759 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptx3P48759 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.83□□□□□ -0.04
Ptx3P48759 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ptx3P48759 Gm18733-201ENSMUST00000173950 856 ntBASIC14.83□□□□□ -0.04
Ptx3P48759 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.83□□□□□ -0.04
Ptx3P48759 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.83□□□□□ -0.04
Ptx3P48759 Gm6296-201ENSMUST00000222599 943 ntBASIC14.83□□□□□ -0.04
Ptx3P48759 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ptx3P48759 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.83□□□□□ -0.04
Ptx3P48759 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.83□□□□□ -0.04
Ptx3P48759 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ptx3P48759 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptx3P48759 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptx3P48759 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ptx3P48759 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ptx3P48759 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Ptx3P48759 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.82□□□□□ -0.04
Ptx3P48759 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ptx3P48759 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.82□□□□□ -0.04
Ptx3P48759 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.82□□□□□ -0.04
Ptx3P48759 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptx3P48759 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.82□□□□□ -0.04
Ptx3P48759 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Ptx3P48759 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ptx3P48759 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Gm7862-201ENSMUST00000121461 292 ntBASIC14.81□□□□□ -0.04
Ptx3P48759 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Gm12497-201ENSMUST00000138778 237 ntBASIC14.81□□□□□ -0.04
Ptx3P48759 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.81□□□□□ -0.04
Ptx3P48759 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.81□□□□□ -0.04
Ptx3P48759 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.81□□□□□ -0.04
Ptx3P48759 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ptx3P48759 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Ptx3P48759 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.81□□□□□ -0.04
Ptx3P48759 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ptx3P48759 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptx3P48759 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ptx3P48759 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.8□□□□□ -0.04
Ptx3P48759 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Gm25406-201ENSMUST00000157599 105 ntBASIC14.8□□□□□ -0.04
Ptx3P48759 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Mir6404-201ENSMUST00000183699 94 ntBASIC14.8□□□□□ -0.04
Ptx3P48759 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ptx3P48759 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.8□□□□□ -0.04
Ptx3P48759 Gm7506-201ENSMUST00000207758 815 ntBASIC14.8□□□□□ -0.04
Ptx3P48759 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.8□□□□□ -0.04
Ptx3P48759 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptx3P48759 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms