Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.05□□□□□ -0.16
GdnfP48540 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
GdnfP48540 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.05□□□□□ -0.16
GdnfP48540 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
GdnfP48540 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.05□□□□□ -0.16
GdnfP48540 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GdnfP48540 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GdnfP48540 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GdnfP48540 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.04□□□□□ -0.16
GdnfP48540 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.04□□□□□ -0.16
GdnfP48540 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GdnfP48540 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.04□□□□□ -0.16
GdnfP48540 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GdnfP48540 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GdnfP48540 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.03□□□□□ -0.16
GdnfP48540 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.03□□□□□ -0.16
GdnfP48540 Gm18958-201ENSMUST00000174258 762 ntBASIC14.03□□□□□ -0.16
GdnfP48540 Gm7889-201ENSMUST00000185591 958 ntBASIC14.03□□□□□ -0.16
GdnfP48540 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.03□□□□□ -0.16
GdnfP48540 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.03□□□□□ -0.16
GdnfP48540 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GdnfP48540 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.03□□□□□ -0.16
GdnfP48540 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GdnfP48540 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GdnfP48540 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
GdnfP48540 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GdnfP48540 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GdnfP48540 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
GdnfP48540 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GdnfP48540 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GdnfP48540 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GdnfP48540 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GdnfP48540 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.02□□□□□ -0.17
GdnfP48540 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms