Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nedd4P46935 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nedd4P46935 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.19■□□□□ 0.66
Nedd4P46935 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.19■□□□□ 0.66
Nedd4P46935 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.19■□□□□ 0.66
Nedd4P46935 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd4P46935 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nedd4P46935 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.18■□□□□ 0.66
Nedd4P46935 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 Gm5866-201ENSMUST00000177881 973 ntBASIC19.18■□□□□ 0.66
Nedd4P46935 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.18■□□□□ 0.66
Nedd4P46935 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nedd4P46935 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nedd4P46935 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd4P46935 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.18■□□□□ 0.66
Nedd4P46935 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nedd4P46935 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Nedd4P46935 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.17■□□□□ 0.66
Nedd4P46935 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Gm27430-201ENSMUST00000184585 107 ntBASIC19.17■□□□□ 0.66
Nedd4P46935 Gm44333-201ENSMUST00000197168 107 ntBASIC19.17■□□□□ 0.66
Nedd4P46935 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.17■□□□□ 0.66
Nedd4P46935 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd4P46935 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nedd4P46935 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.16■□□□□ 0.66
Nedd4P46935 Gm7774-201ENSMUST00000200064 533 ntBASIC19.16■□□□□ 0.66
Nedd4P46935 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Nedd4P46935 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nedd4P46935 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd4P46935 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms