Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Mir449b-201ENSMUST00000104833 80 ntBASIC16.46■□□□□ 0.23
Cxcl12P40224 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.46■□□□□ 0.23
Cxcl12P40224 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Gm23547-201ENSMUST00000158210 271 ntBASIC16.46■□□□□ 0.23
Cxcl12P40224 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Gm43125-201ENSMUST00000201724 730 ntBASIC16.46■□□□□ 0.23
Cxcl12P40224 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.46■□□□□ 0.23
Cxcl12P40224 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cxcl12P40224 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cxcl12P40224 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cxcl12P40224 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cxcl12P40224 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.45■□□□□ 0.22
Cxcl12P40224 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.45■□□□□ 0.22
Cxcl12P40224 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Gm12428-201ENSMUST00000119844 727 ntBASIC16.45■□□□□ 0.22
Cxcl12P40224 Gm11424-201ENSMUST00000121929 829 ntBASIC16.45■□□□□ 0.22
Cxcl12P40224 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.45■□□□□ 0.22
Cxcl12P40224 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cxcl12P40224 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Cxcl12P40224 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cxcl12P40224 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cxcl12P40224 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.45■□□□□ 0.22
Cxcl12P40224 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cxcl12P40224 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cxcl12P40224 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cxcl12P40224 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.44■□□□□ 0.22
Cxcl12P40224 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.44■□□□□ 0.22
Cxcl12P40224 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.44■□□□□ 0.22
Cxcl12P40224 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cxcl12P40224 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.43■□□□□ 0.22
Cxcl12P40224 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cxcl12P40224 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cxcl12P40224 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cxcl12P40224 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms