Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.81□□□□□ -0.04
Foxa1P35582 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.81□□□□□ -0.04
Foxa1P35582 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Foxa1P35582 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Foxa1P35582 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.8□□□□□ -0.04
Foxa1P35582 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.8□□□□□ -0.04
Foxa1P35582 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.8□□□□□ -0.04
Foxa1P35582 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.8□□□□□ -0.04
Foxa1P35582 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Gm18669-201ENSMUST00000216049 778 ntBASIC14.8□□□□□ -0.04
Foxa1P35582 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Foxa1P35582 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Foxa1P35582 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxa1P35582 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Foxa1P35582 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.79□□□□□ -0.04
Foxa1P35582 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Foxa1P35582 Mir6404-201ENSMUST00000183699 94 ntBASIC14.79□□□□□ -0.04
Foxa1P35582 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Gm44454-201ENSMUST00000198541 138 ntBASIC14.79□□□□□ -0.04
Foxa1P35582 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Foxa1P35582 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Foxa1P35582 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Foxa1P35582 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Foxa1P35582 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxa1P35582 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Foxa1P35582 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.78□□□□□ -0.04
Foxa1P35582 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.78□□□□□ -0.04
Foxa1P35582 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.78□□□□□ -0.04
Foxa1P35582 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.78□□□□□ -0.04
Foxa1P35582 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.78□□□□□ -0.04
Foxa1P35582 Gm10819-201ENSMUST00000099988 561 ntBASIC14.78□□□□□ -0.04
Foxa1P35582 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.78□□□□□ -0.04
Foxa1P35582 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxa1P35582 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Foxa1P35582 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Foxa1P35582 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms