Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Gm33142-201ENSMUST00000193913 867 ntBASIC14.8□□□□□ -0.04
Thbs1P35441 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Thbs1P35441 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Thbs1P35441 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Thbs1P35441 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Thbs1P35441 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.79□□□□□ -0.04
Thbs1P35441 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.79□□□□□ -0.04
Thbs1P35441 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.79□□□□□ -0.04
Thbs1P35441 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.79□□□□□ -0.04
Thbs1P35441 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.79□□□□□ -0.04
Thbs1P35441 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Thbs1P35441 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.79□□□□□ -0.04
Thbs1P35441 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Thbs1P35441 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Thbs1P35441 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thbs1P35441 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.79□□□□□ -0.04
Thbs1P35441 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thbs1P35441 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.78□□□□□ -0.04
Thbs1P35441 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.78□□□□□ -0.04
Thbs1P35441 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Thbs1P35441 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Thbs1P35441 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.78□□□□□ -0.04
Thbs1P35441 Mir6404-201ENSMUST00000183699 94 ntBASIC14.78□□□□□ -0.04
Thbs1P35441 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Thbs1P35441 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thbs1P35441 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Thbs1P35441 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thbs1P35441 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.77□□□□□ -0.04
Thbs1P35441 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Thbs1P35441 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Thbs1P35441 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thbs1P35441 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thbs1P35441 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.77□□□□□ -0.05
Thbs1P35441 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thbs1P35441 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms