Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.73■□□□□ 0.11
Hoxa4P06798 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.73■□□□□ 0.11
Hoxa4P06798 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxa4P06798 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.73■□□□□ 0.11
Hoxa4P06798 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.73■□□□□ 0.11
Hoxa4P06798 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa4P06798 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.72■□□□□ 0.11
Hoxa4P06798 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.72■□□□□ 0.11
Hoxa4P06798 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxa4P06798 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Hoxa4P06798 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.72■□□□□ 0.11
Hoxa4P06798 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxa4P06798 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa4P06798 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Gm27741-201ENSMUST00000185060 237 ntBASIC15.71■□□□□ 0.11
Hoxa4P06798 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Gm18622-201ENSMUST00000219361 595 ntBASIC15.71■□□□□ 0.11
Hoxa4P06798 Gm6296-201ENSMUST00000222599 943 ntBASIC15.71■□□□□ 0.11
Hoxa4P06798 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa4P06798 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hoxa4P06798 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Hoxa4P06798 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Dancr-204ENSMUST00000132389 2347 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm4535-201ENSMUST00000182274 558 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44357-201ENSMUST00000195897 142 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm19658-201ENSMUST00000196231 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44367-201ENSMUST00000196836 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44350-201ENSMUST00000197197 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44390-201ENSMUST00000197533 144 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44313-201ENSMUST00000198018 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44486-201ENSMUST00000198508 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44314-201ENSMUST00000199263 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44394-201ENSMUST00000199558 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44484-201ENSMUST00000199873 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44466-201ENSMUST00000200264 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm44359-201ENSMUST00000200671 138 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Gm10355-201ENSMUST00000097146 517 ntBASIC15.7■□□□□ 0.1
Hoxa4P06798 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms