Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.16■□□□□ 0.34
Chrna1P04756 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Chrna1P04756 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.16■□□□□ 0.34
Chrna1P04756 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.16■□□□□ 0.34
Chrna1P04756 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.16■□□□□ 0.34
Chrna1P04756 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna1P04756 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna1P04756 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chrna1P04756 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.16■□□□□ 0.34
Chrna1P04756 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna1P04756 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna1P04756 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chrna1P04756 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna1P04756 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Chrna1P04756 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Chrna1P04756 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chrna1P04756 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chrna1P04756 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Chrna1P04756 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.15■□□□□ 0.34
Chrna1P04756 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Chrna1P04756 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.15■□□□□ 0.34
Chrna1P04756 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chrna1P04756 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.15■□□□□ 0.34
Chrna1P04756 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna1P04756 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Chrna1P04756 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chrna1P04756 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Chrna1P04756 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.14■□□□□ 0.33
Chrna1P04756 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.14■□□□□ 0.33
Chrna1P04756 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.14■□□□□ 0.33
Chrna1P04756 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna1P04756 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chrna1P04756 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Gm6257-201ENSMUST00000163864 910 ntBASIC17.13■□□□□ 0.33
Chrna1P04756 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.13■□□□□ 0.33
Chrna1P04756 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.13■□□□□ 0.33
Chrna1P04756 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.13■□□□□ 0.33
Chrna1P04756 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.13■□□□□ 0.33
Chrna1P04756 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna1P04756 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.12■□□□□ 0.33
Chrna1P04756 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.12■□□□□ 0.33
Chrna1P04756 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Chrna1P04756 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.12■□□□□ 0.33
Chrna1P04756 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna1P04756 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms