Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P04214 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P04214 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.7■□□□□ 0.26
P04214 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04214 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P04214 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.69■□□□□ 0.26
P04214 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.69■□□□□ 0.26
P04214 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
P04214 Gm25948-201ENSMUST00000175334 112 ntBASIC16.69■□□□□ 0.26
P04214 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.69■□□□□ 0.26
P04214 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.69■□□□□ 0.26
P04214 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.69■□□□□ 0.26
P04214 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
P04214 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
P04214 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04214 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.68■□□□□ 0.26
P04214 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
P04214 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Gm18889-201ENSMUST00000174284 929 ntBASIC16.68■□□□□ 0.26
P04214 Thap2-203ENSMUST00000218989 527 ntBASIC16.68■□□□□ 0.26
P04214 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
P04214 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.68■□□□□ 0.26
P04214 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.68■□□□□ 0.26
P04214 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P04214 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04214 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.67■□□□□ 0.26
P04214 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04214 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
P04214 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04214 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
P04214 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.67■□□□□ 0.26
P04214 Rprl2-201ENSMUST00000157150 290 ntBASIC16.67■□□□□ 0.26
P04214 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.67■□□□□ 0.26
P04214 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.67■□□□□ 0.26
P04214 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.67■□□□□ 0.26
P04214 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.67■□□□□ 0.26
P04214 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.67■□□□□ 0.26
P04214 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.67■□□□□ 0.26
P04214 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P04214 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
P04214 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04214 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.66■□□□□ 0.26
P04214 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
P04214 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
P04214 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.66■□□□□ 0.26
P04214 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04214 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.66■□□□□ 0.26
P04214 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P04214 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms