Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01739 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
P01739 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
P01739 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
P01739 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P01739 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.09□□□□□ -0.47
P01739 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P01739 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.09□□□□□ -0.47
P01739 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P01739 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
P01739 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P01739 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01739 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.09□□□□□ -0.47
P01739 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P01739 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
P01739 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P01739 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
P01739 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P01739 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P01739 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.08□□□□□ -0.48
P01739 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Gm11355-201ENSMUST00000121120 306 ntBASIC12.08□□□□□ -0.48
P01739 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.08□□□□□ -0.48
P01739 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.08□□□□□ -0.48
P01739 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.08□□□□□ -0.48
P01739 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.08□□□□□ -0.48
P01739 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.08□□□□□ -0.48
P01739 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
P01739 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01739 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
P01739 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
P01739 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P01739 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.07□□□□□ -0.48
P01739 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms