Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Gm11336-201ENSMUST00000118168 334 ntBASIC14.34□□□□□ -0.11
Hdac3O88895 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hdac3O88895 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hdac3O88895 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.34□□□□□ -0.11
Hdac3O88895 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.34□□□□□ -0.11
Hdac3O88895 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.34□□□□□ -0.11
Hdac3O88895 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
Hdac3O88895 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.34□□□□□ -0.11
Hdac3O88895 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac3O88895 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac3O88895 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac3O88895 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac3O88895 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac3O88895 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac3O88895 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Gm10013-201ENSMUST00000106074 672 ntBASIC14.33□□□□□ -0.12
Hdac3O88895 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Hdac3O88895 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Hdac3O88895 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Hdac3O88895 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac3O88895 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hdac3O88895 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.32□□□□□ -0.12
Hdac3O88895 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Gm11355-201ENSMUST00000121120 306 ntBASIC14.32□□□□□ -0.12
Hdac3O88895 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.32□□□□□ -0.12
Hdac3O88895 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac3O88895 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac3O88895 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.31□□□□□ -0.12
Hdac3O88895 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hdac3O88895 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms