Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Gm11745-201ENSMUST00000121669 448 ntBASIC17.4■□□□□ 0.38
Slc6a20bO88575 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a20bO88575 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a20bO88575 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
Slc6a20bO88575 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a20bO88575 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.39■□□□□ 0.38
Slc6a20bO88575 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm27301-201ENSMUST00000184012 127 ntBASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.39■□□□□ 0.37
Slc6a20bO88575 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.39■□□□□ 0.37
Slc6a20bO88575 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a20bO88575 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.38■□□□□ 0.37
Slc6a20bO88575 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.38■□□□□ 0.37
Slc6a20bO88575 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Mir6990-201ENSMUST00000183724 91 ntBASIC17.38■□□□□ 0.37
Slc6a20bO88575 Gm43474-201ENSMUST00000196415 774 ntBASIC17.38■□□□□ 0.37
Slc6a20bO88575 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.38■□□□□ 0.37
Slc6a20bO88575 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a20bO88575 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gm18489-201ENSMUST00000172565 551 ntBASIC17.37■□□□□ 0.37
Slc6a20bO88575 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.37■□□□□ 0.37
Slc6a20bO88575 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.37■□□□□ 0.37
Slc6a20bO88575 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms