Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sigmar1O55242 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sigmar1O55242 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sigmar1O55242 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.11□□□□□ -0.63
Sigmar1O55242 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Cap2-205ENSMUST00000225824 1634 ntBASIC11.11□□□□□ -0.63
Sigmar1O55242 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.11□□□□□ -0.63
Sigmar1O55242 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sigmar1O55242 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Sigmar1O55242 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.1□□□□□ -0.63
Sigmar1O55242 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sigmar1O55242 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.1□□□□□ -0.63
Sigmar1O55242 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sigmar1O55242 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.1□□□□□ -0.63
Sigmar1O55242 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Sigmar1O55242 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.09□□□□□ -0.63
Sigmar1O55242 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.09□□□□□ -0.63
Sigmar1O55242 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms