Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.92■□□□□ 0.3
Pja1O55176 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.92■□□□□ 0.3
Pja1O55176 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pja1O55176 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Pja1O55176 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pja1O55176 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.91■□□□□ 0.3
Pja1O55176 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Pja1O55176 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.91■□□□□ 0.3
Pja1O55176 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pja1O55176 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pja1O55176 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pja1O55176 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pja1O55176 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.9■□□□□ 0.3
Pja1O55176 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pja1O55176 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pja1O55176 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pja1O55176 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.9■□□□□ 0.3
Pja1O55176 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pja1O55176 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pja1O55176 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Pja1O55176 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.89■□□□□ 0.29
Pja1O55176 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pja1O55176 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.89■□□□□ 0.29
Pja1O55176 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.89■□□□□ 0.29
Pja1O55176 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.89■□□□□ 0.29
Pja1O55176 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.89■□□□□ 0.29
Pja1O55176 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pja1O55176 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Pja1O55176 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pja1O55176 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.89■□□□□ 0.29
Pja1O55176 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pja1O55176 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pja1O55176 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pja1O55176 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms