Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.94■□□□□ 0.14
Scamp3O35609 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Scamp3O35609 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.94■□□□□ 0.14
Scamp3O35609 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scamp3O35609 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Scamp3O35609 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.93■□□□□ 0.14
Scamp3O35609 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Scamp3O35609 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Scamp3O35609 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Scamp3O35609 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Scamp3O35609 Gm43347-201ENSMUST00000200226 580 ntBASIC15.93■□□□□ 0.14
Scamp3O35609 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.93■□□□□ 0.14
Scamp3O35609 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Scamp3O35609 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scamp3O35609 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Scamp3O35609 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Scamp3O35609 Gm13312-201ENSMUST00000119631 718 ntBASIC15.92■□□□□ 0.14
Scamp3O35609 Gm12644-201ENSMUST00000119935 606 ntBASIC15.92■□□□□ 0.14
Scamp3O35609 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.92■□□□□ 0.14
Scamp3O35609 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.92■□□□□ 0.14
Scamp3O35609 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.92■□□□□ 0.14
Scamp3O35609 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.92■□□□□ 0.14
Scamp3O35609 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scamp3O35609 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Scamp3O35609 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Scamp3O35609 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scamp3O35609 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scamp3O35609 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scamp3O35609 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gm11452-201ENSMUST00000122376 690 ntBASIC15.91■□□□□ 0.14
Scamp3O35609 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.91■□□□□ 0.14
Scamp3O35609 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.91■□□□□ 0.14
Scamp3O35609 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scamp3O35609 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.91■□□□□ 0.14
Scamp3O35609 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.91■□□□□ 0.14
Scamp3O35609 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scamp3O35609 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scamp3O35609 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Scamp3O35609 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Scamp3O35609 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms