Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.98□□□□□ -0.01
Abca4O35600 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Abca4O35600 Gm16215-201ENSMUST00000161990 637 ntBASIC14.98□□□□□ -0.01
Abca4O35600 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Abca4O35600 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca4O35600 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Mir6404-201ENSMUST00000183699 94 ntBASIC14.97□□□□□ -0.01
Abca4O35600 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.97□□□□□ -0.01
Abca4O35600 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Gm12859-201ENSMUST00000117834 427 ntBASIC14.97□□□□□ -0.01
Abca4O35600 Gm12138-201ENSMUST00000122180 951 ntBASIC14.97□□□□□ -0.01
Abca4O35600 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Abca4O35600 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca4O35600 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.96□□□□□ -0.01
Abca4O35600 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.96□□□□□ -0.01
Abca4O35600 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Abca4O35600 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Gm9908-201ENSMUST00000211534 448 ntBASIC14.96□□□□□ -0.01
Abca4O35600 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Abca4O35600 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Abca4O35600 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca4O35600 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Abca4O35600 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Abca4O35600 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.95□□□□□ -0.02
Abca4O35600 Mir3547-201ENSMUST00000175461 88 ntBASIC14.95□□□□□ -0.02
Abca4O35600 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.95□□□□□ -0.02
Abca4O35600 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Gm2810-201ENSMUST00000118681 990 ntBASIC14.95□□□□□ -0.02
Abca4O35600 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.95□□□□□ -0.02
Abca4O35600 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca4O35600 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.95□□□□□ -0.02
Abca4O35600 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Abca4O35600 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Abca4O35600 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Abca4O35600 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Abca4O35600 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.94□□□□□ -0.02
Abca4O35600 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.94□□□□□ -0.02
Abca4O35600 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Abca4O35600 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.93□□□□□ -0.02
Abca4O35600 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.93□□□□□ -0.02
Abca4O35600 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Abca4O35600 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Abca4O35600 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Abca4O35600 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Abca4O35600 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms