Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.68□□□□□ -0.38
Efnb3O35393 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.68□□□□□ -0.38
Efnb3O35393 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Gm715-201ENSMUST00000117865 831 ntBASIC12.68□□□□□ -0.38
Efnb3O35393 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.68□□□□□ -0.38
Efnb3O35393 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Efnb3O35393 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.68□□□□□ -0.38
Efnb3O35393 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.68□□□□□ -0.38
Efnb3O35393 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Efnb3O35393 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Efnb3O35393 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Efnb3O35393 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Efnb3O35393 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.67□□□□□ -0.38
Efnb3O35393 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Efnb3O35393 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Efnb3O35393 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.67□□□□□ -0.38
Efnb3O35393 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.67□□□□□ -0.38
Efnb3O35393 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.67□□□□□ -0.38
Efnb3O35393 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Efnb3O35393 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Efnb3O35393 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Efnb3O35393 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.67□□□□□ -0.38
Efnb3O35393 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Efnb3O35393 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.66□□□□□ -0.38
Efnb3O35393 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.66□□□□□ -0.38
Efnb3O35393 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm7791-201ENSMUST00000219066 539 ntBASIC12.66□□□□□ -0.38
Efnb3O35393 Odf3b-204ENSMUST00000227834 930 ntBASIC12.66□□□□□ -0.38
Efnb3O35393 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Efnb3O35393 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Efnb3O35393 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.66□□□□□ -0.38
Efnb3O35393 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.66□□□□□ -0.38
Efnb3O35393 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Efnb3O35393 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Sybu-209ENSMUST00000228639 4113 ntBASIC12.65□□□□□ -0.38
Efnb3O35393 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms