Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Ebf3O08791 Gm25925-201ENSMUST00000158314 306 ntBASIC16.6■□□□□ 0.25
Ebf3O08791 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.6■□□□□ 0.25
Ebf3O08791 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.6■□□□□ 0.25
Ebf3O08791 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ebf3O08791 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.6■□□□□ 0.25
Ebf3O08791 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf3O08791 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ebf3O08791 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf3O08791 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf3O08791 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.59■□□□□ 0.25
Ebf3O08791 Gm5364-201ENSMUST00000216789 889 ntBASIC16.59■□□□□ 0.25
Ebf3O08791 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.59■□□□□ 0.25
Ebf3O08791 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf3O08791 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ebf3O08791 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ebf3O08791 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ebf3O08791 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ebf3O08791 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.58■□□□□ 0.24
Ebf3O08791 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.58■□□□□ 0.24
Ebf3O08791 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.58■□□□□ 0.24
Ebf3O08791 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ebf3O08791 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.57■□□□□ 0.24
Ebf3O08791 Gm13418-201ENSMUST00000119097 944 ntBASIC16.57■□□□□ 0.24
Ebf3O08791 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Mir5126-201ENSMUST00000175513 77 ntBASIC16.57■□□□□ 0.24
Ebf3O08791 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.57■□□□□ 0.24
Ebf3O08791 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.57■□□□□ 0.24
Ebf3O08791 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Ebf3O08791 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ebf3O08791 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ebf3O08791 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ebf3O08791 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ebf3O08791 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ebf3O08791 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms