Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sema3aO08665 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sema3aO08665 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sema3aO08665 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sema3aO08665 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sema3aO08665 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.18■□□□□ 0.18
Sema3aO08665 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.18■□□□□ 0.18
Sema3aO08665 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.18■□□□□ 0.18
Sema3aO08665 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.18■□□□□ 0.18
Sema3aO08665 Gm15372-201ENSMUST00000120729 834 ntBASIC16.18■□□□□ 0.18
Sema3aO08665 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sema3aO08665 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.18■□□□□ 0.18
Sema3aO08665 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sema3aO08665 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sema3aO08665 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.17■□□□□ 0.18
Sema3aO08665 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sema3aO08665 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sema3aO08665 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sema3aO08665 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sema3aO08665 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.17■□□□□ 0.18
Sema3aO08665 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sema3aO08665 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.16■□□□□ 0.18
Sema3aO08665 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
Sema3aO08665 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
Sema3aO08665 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sema3aO08665 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.16■□□□□ 0.18
Sema3aO08665 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sema3aO08665 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sema3aO08665 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sema3aO08665 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sema3aO08665 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.15■□□□□ 0.18
Sema3aO08665 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.15■□□□□ 0.18
Sema3aO08665 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.15■□□□□ 0.18
Sema3aO08665 Ank2-226ENSMUST00000189368 339 ntBASIC16.15■□□□□ 0.18
Sema3aO08665 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sema3aO08665 Gm18669-201ENSMUST00000216049 778 ntBASIC16.15■□□□□ 0.18
Sema3aO08665 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sema3aO08665 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sema3aO08665 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sema3aO08665 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sema3aO08665 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sema3aO08665 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
Sema3aO08665 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Sema3aO08665 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Sema3aO08665 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sema3aO08665 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sema3aO08665 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms