Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sh3yl1O08641 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3yl1O08641 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Gm15794-201ENSMUST00000120182 631 ntBASIC15.26■□□□□ 0.03
Sh3yl1O08641 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.26■□□□□ 0.03
Sh3yl1O08641 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh3yl1O08641 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.25■□□□□ 0.03
Sh3yl1O08641 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Gm9103-201ENSMUST00000119371 405 ntBASIC15.25■□□□□ 0.03
Sh3yl1O08641 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.25■□□□□ 0.03
Sh3yl1O08641 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Gm17807-201ENSMUST00000186869 298 ntBASIC15.25■□□□□ 0.03
Sh3yl1O08641 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sh3yl1O08641 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.24■□□□□ 0.03
Sh3yl1O08641 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3yl1O08641 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms