Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpsf4lE9Q2N0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Gm18669-201ENSMUST00000216049 778 ntBASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpsf4lE9Q2N0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpsf4lE9Q2N0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms