Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21-psA0A140T8R2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Sybu-209ENSMUST00000228639 4113 ntBASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Gm26039-201ENSMUST00000158152 144 ntBASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Gm18959-201ENSMUST00000208954 655 ntBASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21-psA0A140T8R2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.79□□□□□ -0.36
Vma21-psA0A140T8R2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms