Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Gm5587-201ENSMUST00000206270 674 ntBASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv17A0A140T8P8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv17A0A140T8P8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv17A0A140T8P8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Sybu-209ENSMUST00000228639 4113 ntBASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms