Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Sybu-209ENSMUST00000228639 4113 ntBASIC11.16□□□□□ -0.62
Igkv3-9A0A140T8P4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv3-9A0A140T8P4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv3-9A0A140T8P4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv3-9A0A140T8P4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv3-9A0A140T8P4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms