Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm15794-201ENSMUST00000120182 631 ntBASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Olfr129-201ENSMUST00000122318 993 ntBASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm7153-201ENSMUST00000117092 455 ntBASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-1A0A0G2JEU8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms