Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mir770-201ENSMUST00000103252 94 ntBASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm36967-201ENSMUST00000193814 266 ntBASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms