Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-5A0A075B6B9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm8495-201ENSMUST00000188740 694 ntBASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-5A0A075B6B9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms