Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-4A0A075B652 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-4A0A075B652 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Mir6982-201ENSMUST00000184354 68 ntBASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Gm29707-201ENSMUST00000196325 491 ntBASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-4A0A075B652 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Gm10252-201ENSMUST00000209541 832 ntBASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms