Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Gm10052-201ENSMUST00000168019 960 ntBASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Gm7729-201ENSMUST00000050143 801 ntBASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13d-1A0A075B606 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-1A0A075B606 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-1A0A075B606 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Gm12895-201ENSMUST00000122214 226 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms