Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Gm12644-201ENSMUST00000119935 606 ntBASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-5A0A075B604 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Birc2-201ENSMUST00000054878 378 ntBASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-5A0A075B604 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm7153-201ENSMUST00000117092 455 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm25745-201ENSMUST00000174945 133 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm27867-201ENSMUST00000184778 125 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm17971-201ENSMUST00000190239 806 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-5A0A075B604 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7n-5A0A075B604 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7n-5A0A075B604 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7n-5A0A075B604 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7n-5A0A075B604 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms