Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm715-201ENSMUST00000117865 831 ntBASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm11336-201ENSMUST00000118168 334 ntBASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm20760-201ENSMUST00000179197 648 ntBASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-1A0A075B5Z8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-1A0A075B5Z8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm13474-201ENSMUST00000122466 815 ntBASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-1A0A075B5Z8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms