Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
COL4A3BPQ9Y5P4 AC074198.2-201ENST00000508153 258 ntBASIC1.18□□□□□ -2.22
COL4A3BPQ9Y5P4 AC112693.2-201ENST00000556538 232 ntBASIC1.18□□□□□ -2.22
COL4A3BPQ9Y5P4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR563-201ENST00000385080 79 ntBASIC1.17□□□□□ -2.22
COL4A3BPQ9Y5P4 Y_RNA.580-201ENST00000391004 95 ntBASIC1.17□□□□□ -2.22
COL4A3BPQ9Y5P4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU6-690P-201ENST00000365242 106 ntBASIC1.16□□□□□ -2.22
COL4A3BPQ9Y5P4 RPL39P25-201ENST00000449384 154 ntBASIC1.16□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
COL4A3BPQ9Y5P4 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
COL4A3BPQ9Y5P4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU4-11P-201ENST00000365287 132 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORD105-201ENST00000386910 85 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 AL022718.1-201ENST00000412004 84 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 snoU13.21-201ENST00000459368 105 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 AC113410.1-201ENST00000505029 247 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-113P-201ENST00000516653 101 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.778-201ENST00000620203 90 ntBASIC1.15□□□□□ -2.23
COL4A3BPQ9Y5P4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-349P-201ENST00000362402 107 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-886P-201ENST00000384319 105 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR608-201ENST00000384820 100 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 AL353765.1-201ENST00000605514 183 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 AC104465.1-201ENST00000611365 139 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-151P-201ENST00000364158 107 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORD116-18-201ENST00000383961 92 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.555-201ENST00000384673 110 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-394P-201ENST00000410735 107 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 AL662814.1-201ENST00000617364 121 ntBASIC1.13□□□□□ -2.23
COL4A3BPQ9Y5P4 AC023934.1-201ENST00000574529 2389 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR513C-201ENST00000401352 84 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 RNA5SP144-201ENST00000410846 116 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR3668-201ENST00000582138 75 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR4676-201ENST00000583078 72 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORA4-201ENST00000584302 138 ntBASIC1.12□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR30D-201ENST00000362283 70 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 AL603914.1-201ENST00000401964 204 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 ACA64.5-201ENST00000516207 127 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 uc_338.6-201ENST00000613544 171 ntBASIC1.11□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR938-201ENST00000401216 83 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU7-113P-201ENST00000459273 62 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 AC133485.4-201ENST00000561835 220 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 AC138907.4-201ENST00000570107 226 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
COL4A3BPQ9Y5P4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-369P-201ENST00000362515 102 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 PCNPP3-201ENST00000393579 471 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 RNU7-185P-201ENST00000459215 60 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR3144-201ENST00000579460 79 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 MIR4804-201ENST00000581683 73 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
COL4A3BPQ9Y5P4 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
COL4A3BPQ9Y5P4 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU2-60P-201ENST00000517290 128 ntBASIC1.08□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR4305-201ENST00000583252 102 ntBASIC1.08□□□□□ -2.24
COL4A3BPQ9Y5P4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.08□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1130P-201ENST00000365434 107 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-364P-201ENST00000384387 107 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 SNORA18-201ENST00000384416 132 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR125B2-201ENST00000385128 89 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 AC141846.1-201ENST00000568348 142 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
COL4A3BPQ9Y5P4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.8-201ENST00000362353 102 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-804P-201ENST00000384286 107 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR520E-201ENST00000384867 87 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 AC015818.7-201ENST00000428754 109 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 AC087499.7-201ENST00000441958 109 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 AC021443.1-201ENST00000604478 211 ntBASIC1.06□□□□□ -2.24
COL4A3BPQ9Y5P4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 SNORD93-201ENST00000408813 74 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-447P-201ENST00000410293 104 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 342.4 ms