Protein–RNA interactions for Protein: Q9Y466

NR2E1, Nuclear receptor subfamily 2 group E member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E1Q9Y466 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
NR2E1Q9Y466 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 Y_RNA.430-201ENST00000384081 110 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 RNU6-1113P-201ENST00000384348 107 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 RNU4-69P-201ENST00000410677 143 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 AL161935.2-201ENST00000414627 60 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 RPL39P25-201ENST00000449384 154 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 RNU6-904P-201ENST00000516206 101 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.91□□□□□ -2.1
NR2E1Q9Y466 AC141557.1-201ENST00000540982 400 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 MIR3152-201ENST00000579801 74 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
NR2E1Q9Y466 Y_RNA.78-201ENST00000362970 110 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.369-201ENST00000365568 117 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 AC004965.1-201ENST00000413033 213 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
NR2E1Q9Y466 MIR548AE2-201ENST00000583456 67 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 AC006254.2-201ENST00000603259 279 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.9□□□□□ -2.11
NR2E1Q9Y466 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NR2E1Q9Y466 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.11
NR2E1Q9Y466 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NR2E1Q9Y466 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
NR2E1Q9Y466 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.544-201ENST00000384650 113 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 MIR1912-201ENST00000410389 80 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 RNU6-893P-201ENST00000458841 100 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 MIR4764-201ENST00000580680 88 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 MIR8055-201ENST00000610739 97 ntBASIC1.89□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.299-201ENST00000364973 94 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 RNA5SP261-201ENST00000410536 106 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 AL353813.1-201ENST00000440700 253 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 RNU7-43P-201ENST00000516554 64 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 RNA5SP33-201ENST00000516687 98 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 AC008133.2-201ENST00000624540 351 ntBASIC1.88□□□□□ -2.11
NR2E1Q9Y466 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NR2E1Q9Y466 RNU6-363P-201ENST00000362895 105 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 MIR488-201ENST00000365739 83 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.466-201ENST00000384294 113 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 RNU6-616P-201ENST00000384353 107 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 snoU13.16-201ENST00000459350 104 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 snoU13.18-201ENST00000459483 104 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 SNORA40.13-201ENST00000516379 120 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.818-201ENST00000618813 71 ntBASIC1.87□□□□□ -2.11
NR2E1Q9Y466 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
NR2E1Q9Y466 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NR2E1Q9Y466 RNU6-1099P-201ENST00000363533 107 ntBASIC1.86□□□□□ -2.11
NR2E1Q9Y466 RNU6-49P-201ENST00000384256 107 ntBASIC1.86□□□□□ -2.11
NR2E1Q9Y466 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
NR2E1Q9Y466 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
NR2E1Q9Y466 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
NR2E1Q9Y466 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NR2E1Q9Y466 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NR2E1Q9Y466 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NR2E1Q9Y466 RNU4-67P-201ENST00000364569 141 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 RNU6-1131P-201ENST00000364955 107 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.360-201ENST00000365512 102 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 SNORA32-201ENST00000384072 121 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.507-201ENST00000384500 99 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 RNU6-1067P-201ENST00000384752 107 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 MIR520C-201ENST00000385005 87 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 MIR605-201ENST00000385078 83 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NR2E1Q9Y466 RPS3AP1-201ENST00000413190 320 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.85□□□□□ -2.11
NR2E1Q9Y466 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 Z97988.1-201ENST00000637697 135 ntBASIC1.85□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.155-201ENST00000363632 101 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 SNORA1.1-201ENST00000364671 133 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 MIR577-201ENST00000385196 96 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 RNU6-679P-201ENST00000391003 106 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 AC090844.1-201ENST00000422019 156 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 MTATP8P2-201ENST00000435212 202 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 JTBP1-201ENST00000441314 247 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 RNU6-158P-201ENST00000517104 100 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 DEFB131E-201ENST00000532329 154 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 MIR548AO-201ENST00000579992 96 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 MIR8065-201ENST00000620577 100 ntBASIC1.84□□□□□ -2.11
NR2E1Q9Y466 Y_RNA.224-201ENST00000364308 111 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 RNU6-409P-201ENST00000384114 104 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 RNU6-342P-201ENST00000384521 104 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 MIR489-201ENST00000384923 84 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 MIR513A1-201ENST00000385138 129 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 SNORD41-201ENST00000386967 70 ntBASIC1.83□□□□□ -2.12
NR2E1Q9Y466 SNORA7.5-201ENST00000410672 110 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms