Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 RNY1P13-201ENST00000365030 105 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 RNU6-203P-201ENST00000384038 104 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 Y_RNA.607-201ENST00000410597 98 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 AL161932.1-201ENST00000437408 146 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 SPINT5P-201ENST00000448174 155 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 MIR3935-201ENST00000583472 104 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 AL033523.1-201ENST00000605153 153 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TRIM33Q9UPN9 RNU6-1296P-201ENST00000383879 107 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 RNU1-98P-201ENST00000458992 160 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 AC019288.1-201ENST00000557918 224 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 AC012676.2-201ENST00000619258 186 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
TRIM33Q9UPN9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 AC019129.1-201ENST00000403786 261 ntBASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 RNU2-19P-201ENST00000517288 84 ntBASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 AC067747.1-201ENST00000608026 250 ntBASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM33Q9UPN9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 RNU6-859P-201ENST00000362728 107 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 RNU6-480P-201ENST00000384332 107 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 AC055731.1-201ENST00000474387 401 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 RNU7-41P-201ENST00000515917 61 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 MTND5P40-201ENST00000559945 246 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 AC141846.1-201ENST00000568348 142 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 AL513043.2-201ENST00000573941 143 ntBASIC2.34□□□□□ -2.03
TRIM33Q9UPN9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM33Q9UPN9 HSBP1P2-201ENST00000299671 229 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 RNA5SP48-201ENST00000363969 126 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 RNU6-613P-201ENST00000410412 108 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 RNA5SP237-201ENST00000410414 113 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 AL662814.1-201ENST00000617364 121 ntBASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM33Q9UPN9 AL161935.2-201ENST00000414627 60 ntBASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 AC009474.2-201ENST00000451383 136 ntBASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 RNA5SP356-201ENST00000515972 94 ntBASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 AC133485.1-201ENST00000567176 124 ntBASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 MIR6852-201ENST00000621699 66 ntBASIC2.32□□□□□ -2.04
TRIM33Q9UPN9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 RNU6-652P-201ENST00000365488 107 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 SNORA2B-201ENST00000384583 137 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 MIR181B2-201ENST00000385004 89 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 SNORA59A-201ENST00000459326 152 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 MIR4319-201ENST00000577285 85 ntBASIC2.31□□□□□ -2.04
TRIM33Q9UPN9 RNA5SP276-201ENST00000362580 94 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 RNY1P2-201ENST00000364820 117 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 Y_RNA.316-201ENST00000365118 111 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 RNU6-949P-201ENST00000384040 107 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 SNORD111.1-201ENST00000516421 86 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 AC020891.4-201ENST00000605745 93 ntBASIC2.3□□□□□ -2.04
TRIM33Q9UPN9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 SNORD115-27-201ENST00000364430 82 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 AL359511.1-201ENST00000402970 211 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 MIR4662A-201ENST00000637499 67 ntBASIC2.29□□□□□ -2.04
TRIM33Q9UPN9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 MIR519C-201ENST00000385053 87 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 MIR513A1-201ENST00000385138 129 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 snoU13.2-201ENST00000459201 104 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 AP000753.3-201ENST00000604083 169 ntBASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM33Q9UPN9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP133-201ENST00000363368 119 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 RNU6-524P-201ENST00000384270 107 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 SNORD41-201ENST00000386967 70 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP184-201ENST00000411071 108 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 AC244023.1-201ENST00000426884 112 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms