Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MIR3133-201ENST00000583157 78 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 AL022345.2-201ENST00000606307 135 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.38□□□□□ -2.19
HDAC9Q9UKV0 MIR302B-201ENST00000362188 73 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 RNU6-349P-201ENST00000362402 107 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 RNU6-774P-201ENST00000363238 107 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 MTATP6P21-201ENST00000440681 189 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 RNA5SP272-201ENST00000516095 111 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 HSPE1P19-201ENST00000603327 295 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 AP001340.1-201ENST00000624405 217 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
HDAC9Q9UKV0 RNU6-309P-201ENST00000364573 106 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNU6-915P-201ENST00000364943 103 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNY1P6-201ENST00000384193 109 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 SNORA20-201ENST00000384662 132 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 SNORD79.1-201ENST00000516069 84 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.690-201ENST00000516603 95 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 MIR1273G-201ENST00000577677 100 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 MIR6717-201ENST00000622747 73 ntBASIC1.36□□□□□ -2.19
HDAC9Q9UKV0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 Y_RNA.568-201ENST00000384742 113 ntBASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 AC211469.2-201ENST00000605461 205 ntBASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 AC011603.4-201ENST00000611325 277 ntBASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 AC021613.1-201ENST00000623880 111 ntBASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.35□□□□□ -2.19
HDAC9Q9UKV0 RNA5SP457-201ENST00000363657 124 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 SNORA1.1-201ENST00000364671 133 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 RNU6-396P-201ENST00000365369 105 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 SNORD18B-201ENST00000365659 72 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 RNU6-613P-201ENST00000410412 108 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 RNU7-21P-201ENST00000459430 62 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 AP001328.1-201ENST00000528550 176 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
HDAC9Q9UKV0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 AC010332.2-201ENST00000613083 1904 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 RNU4-16P-201ENST00000364737 141 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 SNORA80D-201ENST00000384488 135 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 MT-TN-201ENST00000387400 73 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 SUMO1P3-201ENST00000439961 304 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
HDAC9Q9UKV0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 RNU6-187P-201ENST00000384139 106 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 RNA5SP261-201ENST00000410536 106 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 MIR3121-201ENST00000579680 77 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 AL590095.2-201ENST00000604136 117 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.31□□□□□ -2.2
HDAC9Q9UKV0 RNU6-257P-201ENST00000410238 98 ntBASIC1.31□□□□□ -2.2
HDAC9Q9UKV0 RPS3AP1-201ENST00000413190 320 ntBASIC1.31□□□□□ -2.2
HDAC9Q9UKV0 MTND4LP9-201ENST00000427694 174 ntBASIC1.31□□□□□ -2.2
HDAC9Q9UKV0 AC012676.2-201ENST00000619258 186 ntBASIC1.31□□□□□ -2.2
HDAC9Q9UKV0 MIR377-201ENST00000362145 69 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 RNU6-690P-201ENST00000365242 106 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 SNORD50.2-201ENST00000365465 70 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 SNORD38B-201ENST00000384690 67 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 MIR548M-201ENST00000408260 86 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 RNA5SP95-201ENST00000410319 137 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 RNU6-240P-201ENST00000516098 97 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 CYP3A137P-201ENST00000562436 69 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 MIR3152-201ENST00000579801 74 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 AC108081.1-201ENST00000604358 221 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 U7.2-201ENST00000607576 63 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 SNORD38B-202ENST00000625943 69 ntBASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.29□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.29□□□□□ -2.2
HDAC9Q9UKV0 RNA5SP144-201ENST00000410846 116 ntBASIC1.29□□□□□ -2.2
HDAC9Q9UKV0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.29□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.692-201ENST00000516627 105 ntBASIC1.29□□□□□ -2.2
HDAC9Q9UKV0 SNORA22.1-201ENST00000362701 134 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 RNU7-90P-201ENST00000459216 62 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 AC008163.1-202ENST00000636004 2889 ntBASIC1.28□□□□□ -2.2
HDAC9Q9UKV0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms