Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 U7.3-201ENST00000616123 62 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 AL662814.1-201ENST00000617364 121 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 AC091304.10-201ENST00000641554 121 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 SNORD33-201ENST00000362761 85 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RNY1P13-201ENST00000365030 105 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RNU6-887P-201ENST00000410660 100 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RNY4P29-201ENST00000410801 97 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RPS12P2-201ENST00000439728 269 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RPS29P28-201ENST00000446439 141 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 UBL5P1-201ENST00000507979 193 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RNU6-237P-201ENST00000515985 71 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 RNU6-762P-201ENST00000517107 102 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 AC141846.1-201ENST00000568348 142 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 PRELID3BP2-201ENST00000605362 201 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
FOXD3Q9UJU5 Y_RNA.98-201ENST00000363109 102 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 Y_RNA.140-201ENST00000363474 103 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 RNU6-1237P-201ENST00000384777 107 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 MIR30A-201ENST00000385092 71 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 MT-TN-201ENST00000387400 73 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 RNU6-1321P-201ENST00000390905 107 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 RNU7-48P-201ENST00000458875 63 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 snoU13.9-201ENST00000458927 103 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 snoU13.2-201ENST00000459201 104 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 MIR4264-201ENST00000583520 66 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 AP000942.3-201ENST00000603702 160 ntBASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXD3Q9UJU5 SNORD38.2-201ENST00000384470 69 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR450A2-201ENST00000385022 100 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 RNU6-1307P-201ENST00000391012 103 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 SNORA3.2-201ENST00000408221 125 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR1302-7-201ENST00000408841 72 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 RNU2-40P-201ENST00000410833 196 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 AC244023.1-201ENST00000426884 112 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR2115-201ENST00000516657 100 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 RNU11-2P-201ENST00000516898 142 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR548Z-201ENST00000584743 97 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 AC242498.1-201ENST00000604134 111 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR376B-201ENST00000614515 100 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 MIR8063-201ENST00000621930 81 ntBASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXD3Q9UJU5 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 MIR302D-201ENST00000362275 68 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 RNU6-1134P-201ENST00000365156 101 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 RNU6-949P-201ENST00000384040 107 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 RNU6-820P-201ENST00000384273 107 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 RNU6-813P-201ENST00000384691 107 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 MIR34C-201ENST00000384831 77 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 snoU13.26-201ENST00000459452 105 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 AL133373.1-201ENST00000497098 94 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 AP000753.3-201ENST00000604083 169 ntBASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXD3Q9UJU5 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 MIR504-201ENST00000385065 83 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 MIR563-201ENST00000385080 79 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 RPL30P7-201ENST00000479312 323 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 AC133485.1-201ENST00000567176 124 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 MIR4648-201ENST00000580107 72 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 AP001362.1-201ENST00000625165 124 ntBASIC2.16□□□□□ -2.06
FOXD3Q9UJU5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
FOXD3Q9UJU5 Y_RNA.247-201ENST00000364500 92 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 Y_RNA.467-201ENST00000384297 102 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 RNA5SP445-201ENST00000515889 115 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 AP003716.2-201ENST00000528260 108 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 MIR1273D-201ENST00000577266 86 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
FOXD3Q9UJU5 SNORD116-10-201ENST00000363791 102 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 RNU6-1065P-201ENST00000384513 106 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 MIR588-201ENST00000384900 83 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 AC109327.2-201ENST00000448339 378 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 HMGN2P23-201ENST00000456759 269 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 AC079140.2-201ENST00000506193 142 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 AC105081.1-201ENST00000617727 106 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 MIR7843-201ENST00000622274 79 ntBASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXD3Q9UJU5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 MIR377-201ENST00000362145 69 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 SNORD1A-201ENST00000364968 72 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 MIR548G-201ENST00000408442 89 ntBASIC2.13□□□□□ -2.07
FOXD3Q9UJU5 BTF3P4-201ENST00000418852 495 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 264.7 ms