Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC133794.1-201ENST00000602731 914 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 MIR379-201ENST00000362218 67 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 SNORA19.1-201ENST00000410656 129 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 RNU6-938P-201ENST00000411285 103 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 AC104072.1-201ENST00000568817 668 ntBASIC-1.88□□□□□ -2.71
CHD7Q9P2D1 RNU6-550P-201ENST00000391057 101 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 MTND3P25-201ENST00000509243 135 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 RPL39P5-202ENST00000512505 151 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 SNORA25.10-201ENST00000515926 124 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 MTND2P22-201ENST00000444325 1033 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 SNORD116-30-201ENST00000516468 85 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 AC144568.1-201ENST00000520139 137 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 AC107905.1-201ENST00000616204 426 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 SNORD72-201ENST00000390994 80 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 AC022616.6-201ENST00000520479 119 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 AC005520.4-201ENST00000604337 90 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 AL158063.1-201ENST00000615349 536 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 U6.97-201ENST00000636904 101 ntBASIC-1.89□□□□□ -2.71
CHD7Q9P2D1 SNORD18C-201ENST00000362704 69 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-456P-201ENST00000384493 107 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 MIR520D-201ENST00000385002 87 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 UBL5P4-201ENST00000562584 236 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 U6.58-201ENST00000613107 107 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 MIR369-201ENST00000362155 70 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 AC107399.1-201ENST00000451226 265 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNU6-719P-201ENST00000516671 104 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 CYP3A54P-201ENST00000566950 75 ntBASIC-1.9□□□□□ -2.71
CHD7Q9P2D1 RNY1P16-201ENST00000363063 111 ntBASIC-1.91□□□□□ -2.71
CHD7Q9P2D1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.91□□□□□ -2.71
CHD7Q9P2D1 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.91□□□□□ -2.71
CHD7Q9P2D1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.91□□□□□ -2.71
CHD7Q9P2D1 SNORD36C-201ENST00000516733 66 ntBASIC-1.91□□□□□ -2.71
CHD7Q9P2D1 RNY1P12-201ENST00000364251 105 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 RNU6-524P-201ENST00000384270 107 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 MTND2P6-201ENST00000455337 1030 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 AL021707.8-201ENST00000609428 183 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 AC084781.2-201ENST00000615568 161 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 AC072046.2-201ENST00000618366 268 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 TPTEP1-208ENST00000636884 213 ntBASIC-1.91□□□□□ -2.72
CHD7Q9P2D1 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 AL590004.1-201ENST00000405321 300 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU7-136P-201ENST00000458819 69 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU6-693P-201ENST00000516134 107 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 U6.100-201ENST00000636230 99 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 MIR3941-201ENST00000582572 103 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RMST_3.1-201ENST00000611651 109 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 AP002782.1-201ENST00000623107 614 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU6-170P-201ENST00000362832 104 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 MIR421-201ENST00000365696 85 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU6-946P-201ENST00000383878 107 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 AC026741.1-201ENST00000605892 482 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 AC004467.1-201ENST00000615678 330 ntBASIC-1.92□□□□□ -2.72
CHD7Q9P2D1 RNU1-115P-201ENST00000365329 160 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 SNORA20-201ENST00000384662 132 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 RNU7-35P-201ENST00000517174 62 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 MIR3646-201ENST00000578301 84 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 AC013734.1-201ENST00000619329 111 ntBASIC-1.93□□□□□ -2.72
CHD7Q9P2D1 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 MIR206-201ENST00000384872 86 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 AL031003.1-201ENST00000404229 172 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 RNU2-66P-201ENST00000410650 161 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 RNU6-607P-201ENST00000411283 108 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 RNU2-62P-201ENST00000410868 191 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 AC073415.1-201ENST00000449240 153 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 RNU7-45P-201ENST00000459460 63 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 U6.115-201ENST00000636045 103 ntBASIC-1.94□□□□□ -2.72
CHD7Q9P2D1 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.95□□□□□ -2.72
CHD7Q9P2D1 SNORD116-9-201ENST00000384000 95 ntBASIC-1.95□□□□□ -2.72
CHD7Q9P2D1 SNORD101-201ENST00000384027 73 ntBASIC-1.95□□□□□ -2.72
CHD7Q9P2D1 SNORD116-3-201ENST00000384287 95 ntBASIC-1.95□□□□□ -2.72
CHD7Q9P2D1 SNORD116-8-201ENST00000384365 95 ntBASIC-1.95□□□□□ -2.72
CHD7Q9P2D1 SNORD116-7-201ENST00000384404 95 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 7 ms