Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 Y_RNA.340-201ENST00000365330 92 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 AL034345.1-201ENST00000407768 123 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 MIR3134-201ENST00000579433 74 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 WWP1P1-201ENST00000466609 2769 ntBASIC2.45□□□□□ -2.02
LMCD1Q9NZU5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-833P-201ENST00000363486 107 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 SNORD38.1-201ENST00000363863 68 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 Y_RNA.386-201ENST00000383913 105 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 MIR597-201ENST00000384968 97 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-747P-201ENST00000390928 104 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-129P-201ENST00000391022 107 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU11-3P-201ENST00000391111 133 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-241P-201ENST00000391148 104 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 RNU6-177P-201ENST00000411257 104 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 AC125388.1-201ENST00000459631 156 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 MIR3152-201ENST00000579801 74 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 MIR7111-201ENST00000619751 72 ntBASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMCD1Q9NZU5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 SNORA22.1-201ENST00000362701 134 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 SNORA32-201ENST00000384072 121 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 RNU1-52P-201ENST00000384190 164 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 MIR29C-201ENST00000385231 88 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 SCARNA18B-201ENST00000458806 135 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 RNU7-34P-201ENST00000459394 64 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 MIR4448-201ENST00000584360 86 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 MIR4791-201ENST00000607666 84 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 AP000553.5-201ENST00000641933 54 ntBASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
LMCD1Q9NZU5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 SNORA1.2-201ENST00000365189 134 ntBASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 MIR34C-201ENST00000384831 77 ntBASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 SNORA26.6-201ENST00000391256 115 ntBASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 RNU7-153P-201ENST00000516455 62 ntBASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 MIR514B-201ENST00000516774 80 ntBASIC2.42□□□□□ -2.02
LMCD1Q9NZU5 SNORD115-37-201ENST00000363768 82 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 RNU1-148P-201ENST00000384472 162 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 RNU6-987P-201ENST00000384759 104 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 AL450471.1-201ENST00000447509 127 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 RNU7-2P-201ENST00000516096 62 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 AL513043.2-201ENST00000573941 143 ntBASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
LMCD1Q9NZU5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LMCD1Q9NZU5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.02
LMCD1Q9NZU5 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 RNU6-1094P-201ENST00000362416 104 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 RNU6-624P-201ENST00000363411 107 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 MIR136-201ENST00000385207 82 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 SNORD28B-201ENST00000390993 75 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 MIR1287-201ENST00000408492 90 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 AC087499.7-201ENST00000441958 109 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 RPS29P29-201ENST00000456396 171 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 SNORA25.13-201ENST00000516395 103 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 RNU6-1015P-201ENST00000517121 99 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 MIR548AR-201ENST00000582191 57 ntBASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
LMCD1Q9NZU5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 RNU4-52P-201ENST00000384209 138 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 Y_RNA.567-201ENST00000384736 106 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 MIR206-201ENST00000384872 86 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 SNORA40.18-201ENST00000391200 128 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 RNU7-53P-201ENST00000516705 60 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 MIR6717-201ENST00000622747 73 ntBASIC2.39□□□□□ -2.03
LMCD1Q9NZU5 RNU4-32P-201ENST00000363404 141 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 SNORA70.7-201ENST00000384159 133 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 MIR452-201ENST00000385020 85 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNU6-913P-201ENST00000390913 95 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 MIR548G-201ENST00000408442 89 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNU2-7P-201ENST00000410794 178 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNU1-98P-201ENST00000458992 160 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP137-201ENST00000516833 135 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 MIR4658-201ENST00000584344 65 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 AC243994.1-201ENST00000618627 109 ntBASIC2.38□□□□□ -2.03
LMCD1Q9NZU5 MIRLET7A1-201ENST00000362295 80 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 RNU1-17P-201ENST00000363022 152 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 Y_RNA.173-201ENST00000363776 113 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 313.1 ms