Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.618-201ENST00000410949 107 ntBASIC0.24□□□□□ -2.37
SMPD3Q9NY59 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.24□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.681-201ENST00000516445 113 ntBASIC0.24□□□□□ -2.37
SMPD3Q9NY59 MIR3152-201ENST00000579801 74 ntBASIC0.24□□□□□ -2.37
SMPD3Q9NY59 AC091932.4-201ENST00000623386 200 ntBASIC0.24□□□□□ -2.37
SMPD3Q9NY59 RNU6-1292P-201ENST00000383856 107 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.416-201ENST00000384014 113 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.422-201ENST00000384054 114 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.461-201ENST00000384263 103 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.483-201ENST00000384380 101 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 SNORA20-201ENST00000384662 132 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 RNU4-83P-201ENST00000410863 133 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 AL358176.2-201ENST00000425769 204 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 MTATP8P1-201ENST00000467115 207 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 RNU6-561P-201ENST00000516222 102 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 RNU6-1153P-201ENST00000516760 105 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 AL365205.2-201ENST00000594586 68 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 AL662814.1-201ENST00000617364 121 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 MIR8062-201ENST00000621515 85 ntBASIC0.23□□□□□ -2.37
SMPD3Q9NY59 RNU6-103P-201ENST00000363686 107 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.262-201ENST00000364641 102 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 Y_RNA.430-201ENST00000384081 110 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 SEPT7P4-201ENST00000437076 306 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 RNU7-70P-201ENST00000516941 66 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SMPD3Q9NY59 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.11-201ENST00000362375 109 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.433-201ENST00000384089 102 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.567-201ENST00000384736 106 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 MT-TW-201ENST00000387382 68 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 MIR1197-201ENST00000408818 88 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 MIR8066-201ENST00000617280 78 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
SMPD3Q9NY59 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SMPD3Q9NY59 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.42-201ENST00000362660 108 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 RNU6-597P-201ENST00000365620 102 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 RNU4-43P-201ENST00000410628 137 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.720-201ENST00000517166 92 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 AC006504.6-201ENST00000590142 199 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 AL360085.1-201ENST00000604713 532 ntBASIC0.2□□□□□ -2.38
SMPD3Q9NY59 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.54-201ENST00000362766 105 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 RNU6-403P-201ENST00000363163 104 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.352-201ENST00000365439 102 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.574-201ENST00000384766 95 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.617-201ENST00000410920 90 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 AL121914.1-201ENST00000450188 156 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 SNORD116-25-201ENST00000516517 92 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 AL442067.1-201ENST00000613261 223 ntBASIC0.19□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.13-201ENST00000362403 112 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 SNORA22.1-201ENST00000362701 134 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.277-201ENST00000364754 102 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.518-201ENST00000384552 113 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 RNA5SP193-201ENST00000410353 107 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 RNA5SP395-201ENST00000516567 118 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 RNA5SP285-201ENST00000516619 119 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 AP003072.1-201ENST00000531740 145 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 AC141846.1-201ENST00000568348 142 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 MIR4744-201ENST00000581563 82 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 AC021613.1-201ENST00000623880 111 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 MIR6841-201ENST00000637129 72 ntBASIC0.18□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.170-201ENST00000363746 110 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 RNU6-923P-201ENST00000364753 107 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 RNU6-472P-201ENST00000384299 107 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 U8.15-201ENST00000390947 134 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 AL512326.2-201ENST00000426359 151 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 MIR6082-201ENST00000613604 109 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 MIR371B-201ENST00000638082 66 ntBASIC0.17□□□□□ -2.38
SMPD3Q9NY59 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.292-201ENST00000364904 97 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 SNORA72.6-201ENST00000384520 129 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 RNU6-1160P-201ENST00000384546 104 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 RNU6-765P-201ENST00000516916 99 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 MIR4643-201ENST00000577473 78 ntBASIC0.16□□□□□ -2.38
SMPD3Q9NY59 MIR378D2-201ENST00000580636 98 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms