Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MIR100-201ENST00000385259 80 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 SNORD12C-201ENST00000386307 89 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 SNORD83.1-201ENST00000411362 77 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 RPS26P5-201ENST00000418544 335 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 MIR18B-201ENST00000454574 71 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 RNA5SP236-201ENST00000516169 116 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-182P-201ENST00000516970 105 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
SLC6A13Q9NSD5 AC010332.2-201ENST00000613083 1904 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-369P-201ENST00000362515 102 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-113P-201ENST00000516653 101 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 MIR3658-201ENST00000636291 56 ntBASIC0.86□□□□□ -2.27
SLC6A13Q9NSD5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 SNORA22.1-201ENST00000362701 134 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 MT-TF-201ENST00000387314 71 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-588P-201ENST00000410281 105 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-893P-201ENST00000458841 100 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 AC113410.1-201ENST00000505029 247 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 MIR4771-2-201ENST00000577758 74 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 MIR4771-1-201ENST00000582617 74 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 AC090425.1-201ENST00000610007 140 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.85□□□□□ -2.27
SLC6A13Q9NSD5 RNU4-16P-201ENST00000364737 141 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 SNORD37.2-201ENST00000391075 66 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 RNU6-794P-201ENST00000517261 64 ntBASIC0.84□□□□□ -2.27
SLC6A13Q9NSD5 MTATP6P21-201ENST00000440681 189 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 AC074198.2-201ENST00000508153 258 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
SLC6A13Q9NSD5 MIR30D-201ENST00000362283 70 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-349P-201ENST00000362402 107 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 RNA5SP237-201ENST00000410414 113 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 AC011603.4-201ENST00000611325 277 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 AL662814.1-201ENST00000617364 121 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 FTX_2.1-201ENST00000618816 94 ntBASIC0.82□□□□□ -2.28
SLC6A13Q9NSD5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 AC015818.7-201ENST00000428754 109 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 AC087499.7-201ENST00000441958 109 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 RNU2-60P-201ENST00000517290 128 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 MIR4676-201ENST00000583078 72 ntBASIC0.81□□□□□ -2.28
SLC6A13Q9NSD5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR520F-201ENST00000384824 87 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.584-201ENST00000391090 114 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR1257-201ENST00000408490 117 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 RNA5SP144-201ENST00000410846 116 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR4804-201ENST00000581683 73 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 AC020891.4-201ENST00000605745 93 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 AC023934.1-201ENST00000574529 2389 ntBASIC0.8□□□□□ -2.28
SLC6A13Q9NSD5 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
SLC6A13Q9NSD5 RNU7-185P-201ENST00000459215 60 ntBASIC0.79□□□□□ -2.28
SLC6A13Q9NSD5 AC112693.2-201ENST00000556538 232 ntBASIC0.79□□□□□ -2.28
SLC6A13Q9NSD5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.270-201ENST00000364693 104 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-690P-201ENST00000365242 106 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 RNU4-11P-201ENST00000365287 132 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 SNORD18B-201ENST00000365659 72 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.466-201ENST00000384294 113 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 Y_RNA.580-201ENST00000391004 95 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 MIR938-201ENST00000401216 83 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-394P-201ENST00000410735 107 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 AL022718.1-201ENST00000412004 84 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 MIR3671-201ENST00000580455 88 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 AC104465.1-201ENST00000611365 139 ntBASIC0.78□□□□□ -2.28
SLC6A13Q9NSD5 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.120-201ENST00000363304 110 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-449P-201ENST00000383914 107 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 MIR520H-201ENST00000385126 88 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 MIR125B2-201ENST00000385128 89 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 243.7 ms